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Virology Down Under

Facts, data, info, expert opinion and a reasonable, occasionally grumpy, voice on viruses: what they are, how they tick and the illnesses they may cause.

Category: SARS-CoV-2

The “Infection Pause”: because it’s about fewer infections, not an immune debt to repay

Posted onJuly 31, 2025August 1, 2025

There was a real, measurable shift in the peak season for several endemic human pathogens as well as a rebound in infections, coinfections, and disease severity among them after the Read More …

CategoriesCOVID-19, Infection pause, Pandemic, SARS-CoV-2

Masks matter for more than mandates

Posted onJuly 7, 2022July 1, 20253 Comments

The amount of virus per amount of snot, air, monkey or whatever is a way to describe the concentration of virus present in that thing. It might seem intuitive to Read More …

CategoriesAerosols, COVID-19, Masks, Rhinovirus, SARS-CoV-2TagsInfectious dose, Plaque forming assay, TCID50

NEXTSTRAIN Clades, 02MAY2022

BA.2.12.1 is on the rise in New York…

Posted onMay 2, 2022May 2, 2022

A recently named sub-strain represents the latest twist in the ongoing evolution of SARS-CoV-2. It’s currently active in the United States and looks to be very capable of spreading, outpacing Read More …

CategoriesCOVID-19, SARS-CoV-2, Variants

Unexplained hepatitis: severe liver inflammation among young children

Posted onApril 25, 2022May 11, 20222 Comments

Uncharacterised and so far rare cases of unexplained severe liver inflammation among young children. These cases of unexplained hepatitis have been appearing in elevated numbers worldwide since November 2021. The Read More …

CategoriesAdenovirus, Emerging disease, SARS-CoV-2, Uncategorized

Arrr a piRATe

Arrrrr on the rise (Rhinovirus, RSV and RATs)

Posted onMarch 19, 2022March 26, 2022

Anecdotally there are a lot of acute respiratory virus infections ripping through the community where I live. Particularly noticeable in schools but also workplaces. Yes, there is SARS-CoV-2 among these Read More …

CategoriesRhinovirus, SARS-CoV-2, Transmission

Thank goodness we did all the work

Posted onJanuary 29, 2022July 16, 20226 Comments

Thank goodness we didn’t hold off on opening up to see what Omicron was capable of. We had to have Christmas. And there were national cabinet agreements. Anyway, how could Read More …

CategoriesAerosols, Communication, Coronavirus, COVID-19, Editorial, Enterovirus, Influenza, Parechovirus, Rhinovirus, SARS-CoV-2, Transmission

Living next door to Alice

Posted onJanuary 3, 2022February 7, 20262 Comments

I mean, who wants to say “living with COVID” amirite? The connotation is that it’s just a necessary thing we have to do. But really, at some point, it kind Read More …

CategoriesCoronavirus, COVID-19, SARS-CoV-2, Transmission

The Swiss cheese infographic that went viral

Posted onDecember 26, 2020August 11, 202533 Comments

A visual representation of how to prevent transmission of SARS-CoV-2 struck a chord with many in 2020. I won’t rehash all that has already been written about the Swiss cheese Read More …

CategoriesCommunication, COVID-19, Rhinovirus, SARS-CoV-2

The “false-positive PCR” problem is not a problem

Posted onNovember 22, 2020August 5, 202458 Comments

If you haven’t seen all the chatter that states PCRs using more than thirty-something (someone even suggested 25 to me!) cycles will suffer from false positives, and so are useless, Read More …

CategoriesCoronavirus, COVID-19, PCR, SARS-CoV-2

More testing shows more iceberg

Posted onOctober 29, 2020November 3, 20205 Comments

COVID-19 case numbers are rising quickly in many parts of the northern hemisphere. Already some totals have outstripped the peaks seen in the first wave of the pandemic. Europe and Read More …

CategoriesCOVID-19, PCR, SARS-CoV-2

Yes, PCR tests can detect “the COVID virus”

Posted onAugust 4, 2020July 1, 2025114 Comments

I was asked to write some comments for a fact check article about some of the myths going around about PCR-based testing and whether PCR tests can detect “the COVID Read More …

CategoriesCommunication, Debunking, DNA, Laboratory methods, PCR, Rhinovirus, SARS-CoV-2TagsRT-PCR, RT-rPCR

We don’t yet know the origin story for SARS-CoV-2

Posted onMay 4, 2020May 4, 202025 Comments

By Katherine E Arden, PhD & Ian M Mackay, PhD The existence of a coronavirus related to severe acute respiratory syndrome coronavirus (SARS-CoV) was first hinted at by a researcher Read More …

CategoriesCOVID-19, SARS-CoV-2, Virus discovery

Kits and reagents and viruses

Posted onApril 12, 2020January 2, 202312 Comments

The COVID-19 pandemic has driven the use of the words “kit” and “reagent”. I completely feel for you if you still have no real idea of what is meant by Read More …

CategoriesCOVID-19, Laboratory methods, PCR, SARS-CoV-2

COVID-19 in Australia

Posted onMarch 9, 2020March 9, 202011 Comments

As the cases begin to build up – but are still pretty low with limited community spread having been detected – now is a good time to start watching where Read More …

CategoriesCoronavirus, COVID-19, Pandemic, SARS-CoV-2TagsAustralia, epidemiology

Past Time to Tell the Public: “It Will Probably Go Pandemic, and We Should All Prepare Now”

Posted onFebruary 23, 2020February 23, 2020331 Comments

by Jody Lanard and Peter M. Sandman NOTE FROM IAN: The expert risk communication team of Lanard and Sandman has given me permission to post their very well-considered reply to Read More …

CategoriesCommunication, COVID-19, SARS-CoV-2

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Recent Posts

  • Pathology lab PCR is not research lab PCR January 27, 2026
  • Is there more flu in Australia and New Zealand than normal for Christmas? Hell Yes! December 27, 2025
  • Catch them all? There are three different influenza viruses and they can co-circulate each season August 22, 2025
  • The “Infection Pause”: because it’s about fewer infections, not an immune debt to repay July 31, 2025
  • A Flunami in July July 27, 2025
  • COVID-19 is a Pandemic: What if it was a Pandemic Emergency? And what are they anyway? July 24, 2025
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All opinions are my own and do not represent medical advice or the views of any institution.

All graphics made by me are free-to-use. Please just cite the particular page, blog and me. A heads-up would be nice, but that can happen later.

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Recent Posts

  • Pathology lab PCR is not research lab PCR
  • Is there more flu in Australia and New Zealand than normal for Christmas? Hell Yes!
  • Catch them all? There are three different influenza viruses and they can co-circulate each season
  • The “Infection Pause”: because it’s about fewer infections, not an immune debt to repay
  • A Flunami in July

All opinions are my own and do not represent medical advice or the views of any institution.

All graphics made by me are free-to-use. Please just cite the particular page, blog and me. A heads-up would be nice too but that can happen later.

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