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Virology Down Under

Facts, data, info, expert opinion and a reasonable, occasionally grumpy, voice on viruses: what they are, how they tick and the illnesses they may cause.

Category: COVID-19

WHO to new PCR users: read the damned manual!

Posted onJanuary 23, 2021January 23, 2021Leave a comment

The World Health Organization (WHO) recently published (14th Dec 2020, then updated 20th Jan 2021) a piece of advice for laboratories testing for SARS-CoV-2 using PCR. The advice boils down: Read More …

CategoriesCOVID-19, PCR

The Swiss cheese infographic that went viral

Posted onDecember 26, 2020January 1, 20214 Comments

A visual representation of how to prevent transmission of SARS-CoV-2 struck a chord with many in 2020. I won’t rehash all that has already been written about the Swiss cheese Read More …

CategoriesCommunication, COVID-19, SARS-CoV-2

The “false-positive PCR” problem is not a problem

Posted onNovember 22, 2020December 30, 202050 Comments

If you haven’t seen all the chatter that states PCRs using more than thirty-something (someone even suggested 25 to me!) cycles will suffer from false positives and so is useless, Read More …

CategoriesCoronavirus, COVID-19, PCR, SARS-CoV-2

More testing shows more iceberg

Posted onOctober 29, 2020November 3, 20204 Comments

COVID-19 case numbers are rising quickly in many parts of the northern hemisphere. Already some totals have outstripped the peaks seen in the first wave of the pandemic. Europe and Read More …

CategoriesCOVID-19, PCR, SARS-CoV-2

Sigh, yes, the ‘COVID virus’ is real

Posted onOctober 6, 2020November 3, 202018 Comments

There has been talk out thar in the wildlands of Twitter from people who don’t believe the evidence that the severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) is real. Has Read More …

CategoriesCOVID-19, Debunking, PCR, Virus discovery

And another thing…on false positives

Posted onJune 29, 2020June 29, 202025 Comments

Sometimes the full story can’t fit into a media article. A lot of words can be said during an interview with a journalist but sometimes it’s just really hard to Read More …

CategoriesCoronavirus, COVID-19, Laboratory methods, PCR

Rhinovirus rampant or testing triumphant?

Posted onJune 27, 2020September 14, 202017 Comments

Turns out, this physical distancing thing actually works as advertised. Who would have thought that keeping the things viruses need for their survival – hosts full of cells – far Read More …

CategoriesCOVID-19, Picornavirus, Rhinovirus

We don’t yet know the origin story for SARS-CoV-2

Posted onMay 4, 2020May 4, 202025 Comments

By Katherine E Arden, PhD & Ian M Mackay, PhD The existence of a coronavirus related to severe acute respiratory syndrome coronavirus (SARS-CoV) was first hinted at by a researcher Read More …

CategoriesCOVID-19, SARS-CoV-2, Virus discovery

Kits and reagents and viruses

Posted onApril 12, 2020October 30, 202012 Comments

The COVID-19 pandemic has driven use of the words “kit” and “reagent”. I completely feel for you if you still have no real idea of what is meant by these Read More …

CategoriesCOVID-19, Laboratory methods, PCR, SARS-CoV-2

COVID-19 is not a virus, but SARS-CoV-2 is

Posted onMarch 21, 2020March 23, 202050 Comments

For about two weeks we lived with, published using, and talked about, a disease-causing virus called the “novel coronavirus”. That name was always going to create problems like, what do Read More …

CategoriesCoronavirus, COVID-19

Why does soap work so well on SARS-CoV-2?

Posted onMarch 9, 2020March 9, 202047 Comments

This is a guest post from Prof Palli Thordarson of the Uni of New South Wales. It was previously posted in a Twitter thread and on Facebook and has been Read More …

CategoriesCoronavirus, COVID-19, TransmissionTagsCleaning, Disinfection, Soap

COVID-19 in Australia

Posted onMarch 9, 2020March 9, 202011 Comments

As the cases begin to build up – but are still pretty low with limited community spread having been detected – now is a good time to start watching where Read More …

CategoriesCoronavirus, COVID-19, Pandemic, SARS-CoV-2TagsAustralia, epidemiology

Face off

Posted onMarch 8, 2020March 29, 202015 Comments

We touch our faces often. Maybe 3 to 23 times an hour often! But if our hands haven’t just been washed and we’ve touched surfaces contaminated by viruses surviving in Read More …

CategoriesCoronavirus, COVID-19

Ya es tiempo pasado para decirle al público: ‘Probablemente será una pandemia, y todos deberíamos prepararnos ahora’

Posted onMarch 7, 2020March 7, 2020Leave a comment

Por Jody Lanard y Peter M. Sandman al Español por Daniel Romero-AlvarezPublicado originalmente en Inglés por Ian M. Mackay en su blog personalA translated version of my earlier post, performed Read More …

CategoriesCommunication, Coronavirus, COVID-19

Add some balance to the expert commentary

Posted onMarch 1, 2020July 10, 20208 Comments

Look. If this triggers your innate biases or your need to call me out as a virtue signaler or tell me “now isn’t the time”, seriously save yourself the spittle Read More …

CategoriesCommunication, Coronavirus, COVID-19

Post navigation

← Older posts

Recent Posts

  • WHO to new PCR users: read the damned manual! January 23, 2021
  • Putting PCR into real-time January 2, 2021
  • The mechanics of the polymerase chain reaction (PCR)…a primer December 28, 2020
  • The Swiss cheese infographic that went viral December 26, 2020
  • Happy Festive Season to all who read this…. December 24, 2020
  • The “false-positive PCR” problem is not a problem November 22, 2020
  • More testing shows more iceberg October 29, 2020
  • Sigh, yes, the ‘COVID virus’ is real October 6, 2020
  • Yes, PCR tests can detect “the COVID virus” August 4, 2020
  • And another thing…on false positives June 29, 2020
  • Rhinovirus rampant or testing triumphant? June 27, 2020
  • We don’t yet know the origin story for SARS-CoV-2 May 4, 2020
  • Kits and reagents and viruses April 12, 2020
  • COVID-19 cases slow a little in Australia March 27, 2020
  • COVID-19 is not a virus, but SARS-CoV-2 is March 21, 2020

All opinions are my own and do not represent medical advice or the views of any institution.

All graphics made by me are free-to-use. Please just cite the particular page, blog and me. A heads-up would be nice, but that can happen later.

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Regular reads…

  • FluTrackers-everything infectious, before it happens
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  • Crawford Kilian’s infectious disease blog
  • Pathogen perspectives: Ebola and more
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  • HealthMap
  • STAT News
  • CIDRAP-timely infectious disease reporting
  • Maia Majumder’s blog
  • Kai Kupferschmidt
  • Martin Enserink
  • EpiRamblings

 

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